Submission Results

Sequence Name: Not Available

GenBank Accession Number: AAHGWQ000000000.1

Download Results: AAHGWQ000000000.1.PHASTEST.zip

gi|00000000|ref|NC_000000| Salmonella enterica subsp. enterica serovar Dublin strain 5010431, gc%: 52.12%

Download summary as .txt file:summary.txt file_download

Total:8 prophage regions have been identified, of which 4 regions are intact, 3 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
1364.5Kbquestionable801041311-405882 info_outlinePHAGE_Salmon_SPN1S_NC_016761(2)50.92%Show info_outline
28.3Kbincomplete6012509890-518241 info_outlinePHAGE_Phage_Gifsy_2_NC_010393(3)46.05%Show info_outline
325Kbincomplete5032530205-555293 info_outlinePHAGE_Phage_Gifsy_2_NC_010393(18)51.49%Show info_outline
46Kbincomplete5091898733-1904771 info_outlinePHAGE_Entero_UAB_Phi20_NC_031019(2)40.47%Show info_outline
542.9Kbintact150572098123-2141103 info_outlinePHAGE_Salmon_SEN8_NC_047753(30)51.44%Show info_outline
648Kbintact130752456788-2504834 info_outlinePHAGE_Salmon_ST160_NC_014900(27)47.22%Show info_outline
752.7Kbintact150724424530-4477246 info_outlinePHAGE_Salmon_118970_sal3_NC_031940(66)48.44%Show info_outline
845.5Kbintact150564590068-4635598 info_outlinePHAGE_Phage_Gifsy_2_NC_010393(32)50.97%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|AAHGWQ010000001.1| Salmonella enterica subsp. enterica serovar Dublin strain 5010431, gc%: 52.12%

Download details as .txt file:detail.txt file_download

Tail protein
Phage-like protein
Terminase
Integrase
Transposase
Fiber protein
Plate protein
Holin
Regulatory protein
Hypothetical protein
Replication protein
Lysis protein
Head protein
Portal protein
Membrane protein
Inhibitor protein
Crossover junction protein
Antirepressor
Repressor
Endonuclease
Endodeoxyribonuclease

questionable

Region 1, total 8 CDS

#CDS PositionBLAST HitE-ValueSequence
1400667..400771PP_00408;putative tail assembly chaperone;phage;PHAGE_Salmon_SEN34_NC_0286995.2e-06Show info_outline
2400973..401173PP_00409;PagK-like protein;phage;PHAGE_Phage_Gifsy_1_NC_0103922.91e-40Show info_outline
3401270..402154PP_00410;phage-tail assembly-like protein;phage;-;PROPHAGE_Salmon_LT29.98e-90Show info_outline
4402312..402577PP_00411;bacteriophage terminase, small subunit;phage;-;PHAGE_Salmon_Fels_1_NC_0103916.38e-13Show info_outline
5403312..403845PP_00414;phage-tail assembly-like protein;phage;PROPHAGE_Salmon_LT28.57e-123Show info_outline
6403842..404129PP_00415;putative bacteriophage endolysin;phage;PHAGE_Salmon_Fels_1_NC_0103917.76e-51Show info_outline
7404160..405266PP_00416;exodeoxyribonuclease;phage;-;PHAGE_Erwini_phiEt88_NC_0152951.67e-50Show info_outline
8405263..405882PP_00417;integrase;phage;PHAGE_Entero_HK022_NC_0021663.79e-43Show info_outline

incomplete

Region 2, total 8 CDS

#CDS PositionBLAST HitE-ValueSequence
1509890..510081PP_00521;DinI-like family protein;phage;PHAGE_Entero_mEp390_NC_0197213.35e-33Show info_outline
2511398..512024PP_00524;SOS response associated peptidase;phage;PHAGE_Erwini_vB_EhrS_59_NC_0481981.82e-90Show info_outline
3512156..512574PP_00525;transposase;phage;-;PHAGE_Escher_SH2026Stx1_NC_0499191.18e-05Show info_outline
4512672..513640PP_00526;prophage virulence determinant;secreted effector protein;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
5513866..514114PP_00528;tail-fiber asembly protein;phage;PHAGE_Salmon_SJ46_NC_0311291.49e-24Show info_outline
6514118..514699PP_00529;bacteriophage side tail fiber assembly protein;Lambda gpTfa analog;phage;PHAGE_Phage_Gifsy_2_NC_0103931.16e-142Show info_outline
7514699..516408PP_00530;bacteriophage side tail fiber protein;Lambda gpStf (gpN) homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
8517015..518241PP_00532;baseplate J-like protein;phage;PHAGE_Escher_vB_EcoM_4HA13_NC_0494664.51e-07Show info_outline

incomplete

Region 3, total 29 CDS

#CDS PositionBLAST HitE-ValueSequence
1530205..531779PP_00548;gp18;phage;PHAGE_Burkho_Bcep1_NC_0052632.48e-22Show info_outline
2534057..535328PP_00551;putative terminase large subunit;phage;PHAGE_Salmon_SSU5_NC_0188435.86e-16Show info_outline
3535318..536292PP_00552;terminase small subunit;phage;PHAGE_Burkho_BcepMigl_NC_0199173.39e-46Show info_outline
4536757..537308PP_00554;phage-tail assembly-like protein;phage;PROPHAGE_Salmon_LT21.97e-17Show info_outline
5537305..537919PP_00555;lytic enzyme (putative glycohydrolase);phage;PHAGE_Salmon_ST64B_NC_0043131.27e-141Show info_outline
6537922..538269PP_00556;holin;phage;PHAGE_Entero_SfV_NC_0034441.57e-48Show info_outline
7538668..539465PP_00557;prophage antitermination protein;late gene regulator;Lamba gpQ homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
8539455..539601PP_00558;hypothetical protein;phage;PHAGE_Phage_Gifsy_2_NC_0103931.76e-26Show info_outline
9539598..540209PP_00559;protein NinG;phage;PHAGE_Salmon_SEN34_NC_0286993.48e-146Show info_outline
10540212..540418PP_00560;hypothetical protein;phage;PHAGE_Phage_Gifsy_2_NC_0103932.05e-44Show info_outline
11540418..541020PP_00561;conserved hypothetical bacteriophage protein;phage;PHAGE_Phage_Gifsy_1_NC_0103922.25e-146Show info_outline
12541060..541365PP_00562;hypothetical protein;phage;PHAGE_Salmon_SPN3UB_NC_0195452.16e-53Show info_outline
13541355..541594PP_00563;DinI;phage;PHAGE_Salmon_SPN3UB_NC_0195451.02e-52Show info_outline
14541750..542016PP_00564;hypothetical protein;phage;PHAGE_Salmon_SPN3UB_NC_0195453.7e-59Show info_outline
15542110..542682PP_00565;hypothetical protein;phage;PHAGE_Salmon_ST64T_NC_0043487.39e-66Show info_outline
16542686..543159PP_00566;putative methylase;phage;PHAGE_Pectob_ZF40_NC_0195222.08e-84Show info_outline
17543159..543683PP_00567;hypothetical protein;phage;PHAGE_Salmon_vB_SemP_Emek_NC_0182751.15e-121Show info_outline
18543680..544027PP_00568;hypothetical protein;phage;PHAGE_Phage_Gifsy_2_NC_0103935.91e-79Show info_outline
19544038..544787PP_00569;bacteriophage DNA replication protein;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
20544790..545773PP_00570;bacteriophage DNA replication protein;Lambda gpo homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
21545858..546232PP_00571;probable regulatory protein;transcriptional activator;lambda CII analog;phage;PHAGE_Phage_Gifsy_1_NC_0103921.48e-87Show info_outline
22546198..546434PP_00572;putative Cro;phage;PHAGE_Salmon_SPN3UB_NC_0195457.51e-52Show info_outline
23546564..546968PP_00573;putative CI;phage;PHAGE_Salmon_SPN3UB_NC_0195453.83e-93Show info_outline
24547678..550866PP_00574;RecE;phage;PHAGE_Salmon_SPN3UB_NC_0195450.0Show info_outline
25550829..551988PP_00575;conserved hypothetical bacteriophage protein;phage;-;PHAGE_Phage_Gifsy_2_NC_0103931.25e-72Show info_outline
26552031..552270PP_00576;hypothetical protein;phage;PHAGE_Phage_Gifsy_2_NC_0103931.91e-52Show info_outline
27552311..552559PP_00577;bacteriophage excisionase;phage;PHAGE_Phage_Gifsy_2_NC_0103932.25e-55Show info_outline
28552604..553896PP_00578;bacteriophage integrase;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
29554091..555293PP_00579;nicotinate phosphoribosyltransferase;phage;PHAGE_Agroba_Atu_ph07_NC_0420131.94e-49Show info_outline

incomplete

Region 4, total 8 CDS

#CDS PositionBLAST HitE-ValueSequence
11898733..1898963PP_01878;tailspike protein;phage;PHAGE_Salmon_BTP1_NC_0423461.59e-11Show info_outline
21898902..1899045PP_01879;tailspike protein;phage;PHAGE_Salmon_BTP1_NC_0423461.13e-15Show info_outline
31899418..1899864PP_01880;transposase;phage;-;PROPHAGE_Escher_CFT0732.64e-49Show info_outline
41900035..1901957PP_01881;O-polysaccharide acetyltransferase protein;phage;PHAGE_Salmon_BTP1_NC_0423460.0Show info_outline
51901975..1902229PP_01882;polymyxin resistance protein;phage;PHAGE_Salmon_118970_sal4_NC_0309192.23e-33Show info_outline
61902198..1902587PP_01883;O-antigen conversion protein B;phage;PHAGE_Entero_UAB_Phi20_NC_0310193.76e-73Show info_outline
71902908..1903532PP_01885;ISSod4, transposase;phage;-;PROPHAGE_Shewan_MR-15.15e-07Show info_outline
81903830..1904771PP_01886;hypothetical protein;phage;PHAGE_Entero_VT2phi_272_NC_0286560.0Show info_outline

intact

Region 5, total 47 CDS

#CDS PositionBLAST HitE-ValueSequence
12098242..2098460PP_02063;P2 gpOgr-like protein (acttivation of late gene expression);phage;PHAGE_Salmon_Fels_2_NC_0104633.27e-48Show info_outline
22098529..2099629PP_02064;tail protein;phage;PHAGE_Salmon_Fels_2_NC_0104630.0Show info_outline
32099626..2100111PP_02065;P2 gpU-like tail protein;phage;PHAGE_Salmon_Fels_2_NC_0104631.58e-113Show info_outline
42100108..2102915PP_02066;tail tape measure protein;phage;PHAGE_Salmon_RE_2010_NC_0194880.0Show info_outline
52102908..2103027PP_02067;GpE familygtail protein;phage;PHAGE_Salmon_SEN8_NC_0477533.64e-21Show info_outline
62103042..2103344PP_02068;P2 gpE-like tail protein;phage;PHAGE_Salmon_Fels_2_NC_0104633.56e-64Show info_outline
72103399..2103914PP_02069;major tail tube protein;phage;PHAGE_Salmon_RE_2010_NC_0194883.3e-121Show info_outline
82103924..2105096PP_02070;major tail sheath protein;phage;PHAGE_Salmon_Fels_2_NC_0104630.0Show info_outline
92105227..2105754PP_02071;tail fiber assembly protein;phage;PHAGE_Cronob_ESSI_2_NC_0478543.85e-29Show info_outline
102105757..2107442PP_02072;tail protein;phage;PHAGE_Salmon_SEN8_NC_0477537.0e-148Show info_outline
112107439..2108044PP_02073;tail protein I;phage;PHAGE_Salmon_RE_2010_NC_0194882.43e-148Show info_outline
122108037..2108945PP_02074;baseplate assembly protein;phage;PHAGE_Salmon_SEN8_NC_0477530.0Show info_outline
132108932..2109291PP_02075;baseplate wedge subunit;phage;PHAGE_Salmon_Fels_2_NC_0104632.16e-71Show info_outline
142109288..2109866PP_02076;putative phage baseplate assembly protein;phage;PROPHAGE_Salmon_Ty22.58e-128Show info_outline
152109962..2110828PP_02077;hypothetical protein;phage;PHAGE_Klebsi_ST437_OXA245phi4.1_NC_0494481.57e-108Show info_outline
162110855..2111301PP_02078;putative phage tail protein;phage;PROPHAGE_Salmon_Ty28.37e-96Show info_outline
172111294..2111725PP_02079;tail protein;phage;PHAGE_Klebsi_4LV2017_NC_0478185.03e-101Show info_outline
182111688..2111891PP_02080;P2 LysC-like protein;phage;PHAGE_Salmon_Fels_2_NC_0104639.98e-31Show info_outline
192111821..2112249PP_02081;LysB familyglysis regulatory protein;phage;PHAGE_Klebsi_4LV2017_NC_0478181.71e-79Show info_outline
202112246..2112623PP_02082;hypothetical protein;phage;PHAGE_Klebsi_4LV2017_NC_0478181.47e-80Show info_outline
212112625..2113098PP_02083;lysozyme;phage;PHAGE_Klebsi_4LV2017_NC_0478181.78e-112Show info_outline
222113118..2113333PP_02084;holin;phage;PHAGE_Klebsi_ST437_OXA245phi4.2_NC_0494491.42e-37Show info_outline
232113337..2113540PP_02085;tail protein X;phage;PHAGE_Escher_500465_1_NC_0493424.93e-44Show info_outline
242113540..2114004PP_02086;head completion/stabilization protein;phage;PHAGE_Escher_500465_1_NC_0493423.42e-111Show info_outline
252114100..2114750PP_02087;terminase endonuclease subunit;phage;PHAGE_Klebsi_4LV2017_NC_0478181.06e-154Show info_outline
262114754..2115812PP_02088;major capsid protein, P2 family;phage;PHAGE_Klebsi_4LV2017_NC_0478180.0Show info_outline
272115829..2116662PP_02089;GPO family capsid scaffolding protein;phage;PHAGE_Escher_500465_1_NC_0493420.0Show info_outline
282116805..2118571PP_02090;oxidoreductase;phage;PHAGE_Klebsi_ST437_OXA245phi4.2_NC_0494490.0Show info_outline
292118571..2119602PP_02091;portal protein;phage;PHAGE_Klebsi_ST437_OXA245phi4.2_NC_0494490.0Show info_outline
302120382..2121536PP_02093;hypothetical protein;phage;PHAGE_Klebsi_ST16_OXA48phi5.4_NC_0494502.04e-27Show info_outline
312121573..2121755PP_02094;hypothetical protein;phage;-;PHAGE_Klebsi_ST13_OXA48phi12.1_NC_0494535.07e-14Show info_outline
322123314..2123502PP_02097;hypothetical protein;phage;PHAGE_Salmon_SEN8_NC_0477537.69e-38Show info_outline
332123658..2126054PP_02098;replication protein;phage;PHAGE_Salmon_RE_2010_NC_0194880.0Show info_outline
342126051..2126908PP_02099;DNA adenine methyltransferase;phage;PHAGE_Salmon_RE_2010_NC_0194880.0Show info_outline
352126905..2127132PP_02100;DksA-like zinc finger domain containing protein;phage;PHAGE_Salmon_Fels_2_NC_0104631.4e-49Show info_outline
362127132..2127365PP_02101;hypothetical protein;phage;PHAGE_Salmon_Fels_2_NC_0104631.54e-48Show info_outline
372127433..2127774PP_02102;hypothetical protein;phage;PHAGE_Salmon_Fels_2_NC_0104633.46e-78Show info_outline
382128400..2128633PP_02104;hypothetical protein;phage;PHAGE_Salmon_Fels_2_NC_0104632.4e-51Show info_outline
392128641..2129151PP_02105;bacteriophage regulatory protein CII;phage;-;PHAGE_Salmon_Fels_2_NC_0104632.18e-92Show info_outline
402129187..2129426PP_02106;Rha family transcriptional regulator;phage;PHAGE_Klebsi_ST15_OXA48phi14.1_NC_0494542.59e-53Show info_outline
412129543..2130175PP_02107;P2 CI-like protein;phage;PHAGE_Salmon_Fels_2_NC_0104631.32e-153Show info_outline
422130179..2131204PP_02108;site-specific integrase;phage;PHAGE_Salmon_SEN8_NC_0477530.0Show info_outline
432132456..2133259PP_02110;hypothetical bacteriophage protein;phage;PHAGE_Mannhe_phiMHaA1_NC_0082011.0e-74Show info_outline
442133956..2134039PP_02112;transposase;phage;-;PROPHAGE_Salmon_Ty23.02e-14Show info_outline
452134055..2135166PP_02113;ISxcC1 transposase;phage;PROPHAGE_Xantho_339131.26e-104Show info_outline
462135242..2135625PP_02114;transposase;phage;-;PROPHAGE_Salmon_Ty21.08e-87Show info_outline
472137447..2141103PP_02119;ABC transporter;phage;PHAGE_Bacill_SPbeta_NC_0018849.39e-25Show info_outline

intact

Region 6, total 71 CDS

#CDS PositionBLAST HitE-ValueSequence
12456788..2457642PP_02435;AraC family transcriptional regulator;phage;PHAGE_Bordet_vB_BbrM_PHB04_NC_0478612.88e-07Show info_outline
22459180..2459542PP_02439;bactoprenol-linked glucose translocase;phage;PHAGE_Salmon_SPN9CC_NC_0179859.15e-83Show info_outline
32459539..2460465PP_02440;O-antigen conversion protein;phage;PHAGE_Salmon_SPN9CC_NC_0179850.0Show info_outline
42460446..2462098PP_02441;GtrC;putative membrane protein;phage;PHAGE_Salmon_epsilon34_NC_0119761.01e-101Show info_outline
52462485..2463152PP_02442;ISxac3 transposase;phage;-;PROPHAGE_Xantho_339133.17e-14Show info_outline
62463582..2463944PP_02443;O-antigen conversion protein B;phage;PHAGE_Entero_UAB_Phi20_NC_0310195.85e-83Show info_outline
72463941..2464873PP_02444;GtrB;phage;PHAGE_Salmon_ST160_NC_0149000.0Show info_outline
82464863..2466320PP_02445;GtrC;phage;PHAGE_Salmon_ST160_NC_0149000.0Show info_outline
92466379..2468382PP_02446;tail spike protein;phage;PHAGE_Salmon_ST64T_NC_0043480.0Show info_outline
102468518..2468769PP_02447;Mnt;phage;PHAGE_Salmon_ST160_NC_0149001.83e-54Show info_outline
112468869..2469048PP_02448;hypothetical protein;phage;PHAGE_Salmon_SE1_NC_0118025.09e-36Show info_outline
122469062..2469427PP_02449;hypothetical protein;phage;PHAGE_Salmon_ST160_NC_0149002.15e-87Show info_outline
132469805..2471718PP_02451;injection protein;phage;PHAGE_Entero_UAB_Phi20_NC_0310190.0Show info_outline
142471718..2473022PP_02452;injection protein;phage;PHAGE_Entero_UAB_Phi20_NC_0310191.88e-161Show info_outline
152473033..2473722PP_02453;injection protein;phage;PHAGE_Salmon_vB_SemP_Emek_NC_0182756.22e-129Show info_outline
162473725..2474180PP_02454;head assembly protein;phage;PHAGE_Salmon_SE1_NC_0118023.26e-111Show info_outline
172474180..2474881PP_02455;Tail accessory protein;phage;PHAGE_Salmon_epsilon34_NC_0119761.97e-148Show info_outline
182474885..2476303PP_02456;Tail accessory protein;phage;PHAGE_Salmon_epsilon34_NC_0119760.0Show info_outline
192476263..2476763PP_02457;tail hub protein;phage;PHAGE_Salmon_BTP1_NC_0423461.23e-121Show info_outline
202476747..2477307PP_02458;hypothetical protein;phage;PHAGE_Salmon_g341c_NC_0130592.63e-133Show info_outline
212477348..2478640PP_02459;Coat protein;phage;PHAGE_Salmon_g341c_NC_0130590.0Show info_outline
222478640..2479551PP_02460;capsid scaffolding protein;phage;PHAGE_Salmon_BTP1_NC_0423460.0Show info_outline
232479565..2481742PP_02461;portal protein;phage;PHAGE_Salmon_vB_SemP_Emek_NC_0182750.0Show info_outline
242481742..2483241PP_02462;Terminase, large subunit;phage;PHAGE_Salmon_g341c_NC_0130590.0Show info_outline
252483219..2483707PP_02463;hypothetical protein;phage;PHAGE_Salmon_UPF_BP1_NC_0478751.4e-118Show info_outline
262483711..2484115PP_02464;hypothetical protein;phage;PHAGE_Salmon_g341c_NC_0130595.32e-92Show info_outline
272484115..2484504PP_02465;hypothetical protein;phage;PHAGE_Salmon_g341c_NC_0130592.65e-93Show info_outline
282484508..2484750PP_02466;DUF2560 family protein;phage;PHAGE_Salmon_UPF_BP1_NC_0478755.05e-52Show info_outline
292485009..2485539PP_02467;KilA-N domain-containing protein;phage;PHAGE_Salmon_UPF_BP1_NC_0478751.19e-123Show info_outline
302485493..2485717PP_02468;hypothetical protein;phage;PHAGE_Salmon_118970_sal4_NC_0309192.97e-35Show info_outline
312485752..2486222PP_02469;gp15;phage;PHAGE_Entero_ST104_NC_0058414.79e-80Show info_outline
322486219..2486656PP_02470;gp76;phage;PHAGE_Entero_ES18_NC_0069496.65e-101Show info_outline
332486640..2486966PP_02471;inhibitor of gene 13 protein holin;phage;PHAGE_Entero_UAB_Phi20_NC_0310194.21e-73Show info_outline
342487102..2487299PP_02472;hypothetical protein;phage;PHAGE_Salmon_g341c_NC_0130594.25e-31Show info_outline
352487346..2487834PP_02473;antitermination protein Q;phage;PHAGE_Salmon_vB_SosS_Oslo_NC_0182796.24e-103Show info_outline
362487904..2488107PP_02474;hypothetical protein;phage;PHAGE_Salmon_BTP1_NC_0423463.47e-41Show info_outline
372488104..2488499PP_02475;holliday junction resolvase / crossover junction endodeoxyribonuclease rusA;phage;PHAGE_Salmon_SEN22_NC_0286962.22e-91Show info_outline
382488496..2488792PP_02476;hypothetical protein;phage;PHAGE_Salmon_SEN22_NC_0286961.56e-65Show info_outline
392488755..2488931PP_02477;NinF protein;phage;PHAGE_Salmon_SEN22_NC_0286961.1e-35Show info_outline
402488928..2489110PP_02478;NinE protein;phage;PHAGE_Entero_c_1_NC_0197064.42e-35Show info_outline
412489077..2489250PP_02479;NinD;phage;PHAGE_Entero_UAB_Phi20_NC_0310191.47e-33Show info_outline
422489247..2490119PP_02480;NinC protein;phage;PHAGE_Salmon_vB_SosS_Oslo_NC_0182790.0Show info_outline
432490116..2490556PP_02481;NinB protein;phage;PHAGE_Entero_mEp234_NC_0197152.73e-102Show info_outline
442490630..2492006PP_02482;hypothetical protein;phage;PHAGE_Salmon_103203_sal5_NC_0319460.0Show info_outline
452492003..2492822PP_02483;replication protein;phage;-;PHAGE_Salmon_UPF_BP1_NC_0478755.7e-106Show info_outline
462492815..2492961PP_02484;DUF2740 family protein;phage;PHAGE_Salmon_UPF_BP1_NC_0478753.47e-27Show info_outline
472492996..2493277PP_02485;transcriptional activator;phage;PHAGE_Salmon_BTP1_NC_0423462.0e-62Show info_outline
482493388..2493603PP_02486;antirepressor protein;phage;PHAGE_Salmon_BTP1_NC_0423462.12e-44Show info_outline
492493714..2494403PP_02487;repressor protein;phage;PHAGE_Salmon_BTP1_NC_0423461.05e-168Show info_outline
502494492..2495415PP_02488;ST313-td protein;phage;PHAGE_Salmon_BTP1_NC_0423460.0Show info_outline
512495451..2495660PP_02489;hypothetical protein;phage;PHAGE_Salmon_vB_SosS_Oslo_NC_0182796.41e-39Show info_outline
522495807..2496004PP_02490;hypothetical protein;phage;PHAGE_Entero_UAB_Phi20_NC_0310199.12e-16Show info_outline
532496024..2496356PP_02491;antitermination protein;phage;PHAGE_Salmon_BTP1_NC_0423468.21e-76Show info_outline
542496435..2496635PP_02492;antirestriction protein;phage;PHAGE_Salmon_BTP1_NC_0423467.33e-42Show info_outline
552496675..2496974PP_02493;hypothetical protein;phage;PHAGE_Salmon_BTP1_NC_0423461.26e-66Show info_outline
562497298..2497438PP_02494;regulatory protein CIII;phage;PHAGE_Stx2_c_Stx2a_WGPS9_NC_0499234.36e-23Show info_outline
572497431..2497544PP_02495;host-killing protein Kil;phage;PHAGE_Salmon_epsilon34_NC_0119762.21e-19Show info_outline
582497541..2497729PP_02496;recombination protein;phage;PHAGE_Salmon_ST160_NC_0149005.2e-40Show info_outline
592497738..2498445PP_02497;recombination protein;phage;PHAGE_Salmon_ST160_NC_0149001.79e-172Show info_outline
602498446..2498952PP_02498;ssDNA binding protein;phage;PHAGE_Salmon_g341c_NC_0130591.82e-121Show info_outline
612498961..2499509PP_02499;endonuclease;phage;PHAGE_Salmon_g341c_NC_0130596.49e-135Show info_outline
622499525..2499818PP_02500;Putative ABC transporter ATP-binding protein;phage;PHAGE_Salmon_g341c_NC_0130594.47e-66Show info_outline
632499829..2499999PP_02501;hypothetical protein;phage;PHAGE_Salmon_SEN22_NC_0286963.8e-34Show info_outline
642499996..2500577PP_02502;EaE;phage;PHAGE_Entero_P22_NC_0023712.42e-92Show info_outline
652500962..2501255PP_02503;Gp43;phage;PHAGE_Klebsi_phiKO2_NC_0058574.18e-46Show info_outline
662501252..2501932PP_02504;hypothetical protein;phage;-;PHAGE_Salmon_ST64T_NC_0043484.12e-121Show info_outline
672502327..2502608PP_02505;hypothetical protein;phage;PHAGE_Escher_phiV10_NC_0078041.21e-62Show info_outline
682502702..2503001PP_02506;hypothetical protein;phage;PHAGE_Entero_933W_NC_0009241.61e-68Show info_outline
692503079..2503423PP_02507;hypothetical protein;phage;PHAGE_Entero_c_1_NC_0197063.76e-78Show info_outline
702503426..2503761PP_02508;Excisionase;phage;-;PHAGE_Salmon_epsilon34_NC_0119766.41e-60Show info_outline
712503653..2504816PP_02509;integrase;phage;PHAGE_Salmon_SEN22_NC_0286960.0Show info_outline

intact

Region 7, total 59 CDS

#CDS PositionBLAST HitE-ValueSequence
14424530..4425552PP_04403;IS110 family transposase;phage;PROPHAGE_Shewan_MR-16.56e-76Show info_outline
24425619..4425753PP_04404;isrso12-transposase orfa protein;phage;-;PROPHAGE_Ralsto_GMI10002.09e-16Show info_outline
34428175..4428396PP_04408;site-specific recombinase;phage;PHAGE_Salmon_SJ46_NC_0311291.96e-15Show info_outline
44428609..4429616PP_04409;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
54429901..4430470PP_04410;Probable tail fiber assembly protein;phage;PHAGE_Salmon_ST64B_NC_0043132.01e-138Show info_outline
64430470..4432032PP_04411;tail protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
74432019..4432606PP_04412;putative tail protein;phage;PHAGE_Salmon_118970_sal3_NC_0319401.06e-144Show info_outline
84432609..4433688PP_04413;base plate J protein;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
94433681..4434094PP_04414;putative tail protein;phage;PHAGE_Salmon_ST64B_NC_0043135.35e-96Show info_outline
104434099..4434632PP_04415;putative base plate assembly protein;phage;PHAGE_Salmon_ST64B_NC_0043133.3e-129Show info_outline
114434625..4435689PP_04416;Tail protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
124435686..4437026PP_04417;tail/DNA circulation protein;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
134437060..4438988PP_04418;tail protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
144439073..4439399PP_04419;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319402.05e-73Show info_outline
154439396..4439752PP_04420;tail tube protein;phage;PHAGE_Salmon_118970_sal3_NC_0319403.2e-83Show info_outline
164439752..4441248PP_04421;Tail Sheath protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
174441238..4441402PP_04422;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043132.63e-32Show info_outline
184441406..4441966PP_04423;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043138.27e-136Show info_outline
194441963..4442475PP_04424;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043136.51e-121Show info_outline
204442447..4442851PP_04425;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319402.57e-95Show info_outline
214442848..4443171PP_04426;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319404.05e-73Show info_outline
224443174..4443374PP_04427;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043131.38e-41Show info_outline
234443425..4444630PP_04428;Major capsid protein precursor;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
244444645..4445295PP_04429;pro-head protease;phage;-;PHAGE_Salmon_118970_sal3_NC_0319403.97e-153Show info_outline
254445273..4446513PP_04430;Portal Protein;phage;-;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
264446513..4446695PP_04431;putative integral membrane protein;phage;PHAGE_Salmon_ST64B_NC_0043136.74e-35Show info_outline
274446707..4448440PP_04432;Terminase large subunit;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
284448437..4448931PP_04433;terminase small subunit;phage;PHAGE_Salmon_ST64B_NC_0043131.84e-117Show info_outline
294449058..4449408PP_04434;HNH endonuclease;phage;PHAGE_Entero_SfI_NC_0273393.72e-79Show info_outline
304450496..4450888PP_04436;putative Rz lytic protein;phage;PHAGE_Entero_SfV_NC_0034441.45e-83Show info_outline
314450872..4451348PP_04437;lysin;phage;PHAGE_Entero_SfV_NC_0034447.14e-111Show info_outline
324451352..4451705PP_04438;holin;phage;PHAGE_Entero_SfV_NC_0034441.22e-57Show info_outline
334452368..4453120PP_04441;antitermination protein Q;phage;PHAGE_Entero_SfV_NC_0034441.11e-176Show info_outline
344453134..4454123PP_04442;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
354454131..4454991PP_04443;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
364455008..4455397PP_04444;holiday-junction resolvase;phage;PHAGE_Salmon_118970_sal3_NC_0319404.4e-92Show info_outline
374455406..4456287PP_04445;methyl-directed repair DNA adenine methylase;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
384456284..4456757PP_04446;putative transcriptional activator;phage;PHAGE_Salmon_118970_sal3_NC_0319403.69e-68Show info_outline
394456754..4457728PP_04447;putative transcriptional activator;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
404457725..4457949PP_04448;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319402.03e-50Show info_outline
414457946..4459088PP_04449;putative antirepressor;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
424459085..4459639PP_04450;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319401.68e-133Show info_outline
434459668..4459892PP_04451;DNA binding protein;phage;PHAGE_Salmon_118970_sal3_NC_0319407.23e-49Show info_outline
444459990..4460685PP_04453;regulatory protein;phage;PHAGE_Salmon_118970_sal3_NC_0319401.3e-168Show info_outline
454460890..4461075PP_04454;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319401.91e-18Show info_outline
464461235..4461531PP_04456;hypothetical protein;phage;PHAGE_Entero_SfV_NC_0034441.61e-66Show info_outline
474462231..4462602PP_04458;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043139.73e-86Show info_outline
484462660..4463487PP_04459;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043130.0Show info_outline
494463624..4464163PP_04460;hypothetical protein;phage;PHAGE_Salmon_118970_sal3_NC_0319403.55e-129Show info_outline
504464234..4464971PP_04461;hypothetical protein;phage;PHAGE_Salmon_SEN22_NC_0286962.67e-104Show info_outline
514464971..4465444PP_04462;putative methylase;phage;PHAGE_Pectob_ZF40_NC_0195223.23e-86Show info_outline
524465448..4466197PP_04463;putative Eaa protein;phage;PHAGE_Salmon_SPN3UB_NC_0195453.54e-58Show info_outline
534466194..4466763PP_04464;endodeoxyribonuclease;phage;PHAGE_Salmon_118970_sal3_NC_0319403.92e-131Show info_outline
544466788..4467030PP_04465;hypothetical protein;phage;PHAGE_Salmon_ST64B_NC_0043139.08e-54Show info_outline
554467032..4468021PP_04466;integrase protein;phage;PHAGE_Salmon_118970_sal3_NC_0319400.0Show info_outline
564469466..4470740PP_04468;putative P4-type integrase;phage;PROPHAGE_Shigel_3012.8e-178Show info_outline
574470812..4471063PP_04469;hypothetical protein;phage;PHAGE_Clostr_phiMMP02_NC_0194216.64e-06Show info_outline
584471327..4471518PP_04470;P4 family integrase;phage;-;PROPHAGE_Escher_CFT0735.58e-15Show info_outline
594473375..4474256PP_04474;hypothetical protein;phage;PHAGE_Thermu_OH2_NC_0217841.52e-39Show info_outline

intact

Region 8, total 44 CDS

#CDS PositionBLAST HitE-ValueSequence
14590068..4590306PP_04578;serine-type DNA invertase Fin;phage;-;PHAGE_Salmon_SEN8_NC_0477534.66e-15Show info_outline
24591443..4592012PP_04580;bacteriophage side tail fiber assembly protein;Lambda gpTfa analog;phage;PHAGE_Phage_Gifsy_2_NC_0103933.29e-127Show info_outline
34592012..4594429PP_04581;bacteriophage side tail fiber protein;Lambda gpStf (gpN) homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
44594483..4594725PP_04582;hypothetical protein;phage;PHAGE_Phage_Gifsy_2_NC_0103937.03e-53Show info_outline
54594764..4595627PP_04583;pseudogene;bacteriophage tail fiber C-terminus (Host specificity);Lambda gpJ homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
64595667..4598116PP_04584;bacteriophage tail fiber (host specificity) protein;Lambda gp J homolog;phage;-;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
74598188..4598892PP_04585;bacteriophage tail tip assembly protein;Lambda gpI homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103931.35e-169Show info_outline
84598796..4599527PP_04586;bacteriophage tail tip assembly protein;Lambda gpK homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
94599537..4600232PP_04587;bacteriophage tail tip assembly protein;Lambda gpL homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103931.3e-172Show info_outline
104600322..4600855PP_04588;bacteriophage virulence determinant;superoxide dismutase precursor;phage;PHAGE_Phage_Gifsy_2_NC_0103938.32e-125Show info_outline
114600972..4601469PP_04589;bacteriophage virulence determinant;Lom homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103933.3e-112Show info_outline
124601568..4601900PP_04590;bacteriophage tail tip assembly protein;Lambda gpM homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103931.08e-77Show info_outline
134601897..4604884PP_04591;bacteriophage tail tape measure protein;minor tail protein;Lambda gpH homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
144604964..4605293PP_04592;bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein;Lambda gpT homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103931.67e-73Show info_outline
154605290..4605688PP_04593;bacteriophage tail assembly chaperone;Lambda gpG homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103939.07e-91Show info_outline
164605734..4606483PP_04594;bacteriophage major tail protein;Lambda gpV homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103939.62e-179Show info_outline
174606495..4606896PP_04595;bacteriophage tail shaft stabilization protein;Lambda gpU homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103931.24e-92Show info_outline
184606893..4607459PP_04596;minor tail protein;phage;PHAGE_Entero_c_1_NC_0197061.59e-35Show info_outline
194607440..4607739PP_04597;conserved hypothetical bacteriophage protein;phage;PHAGE_Phage_Gifsy_2_NC_0103934.66e-65Show info_outline
204607732..4608055PP_04598;conserved hypothetical bacteriophage protein;phage;PHAGE_Phage_Gifsy_2_NC_0103931.14e-69Show info_outline
214608146..4610227PP_04599;bacteriophage Clp protease involved in capsid processing;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
224610151..4611668PP_04600;bacteriophage portal protein;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
234611695..4611901PP_04601;conserved hypothetical bacteriophage protein;phage;PHAGE_Phage_Gifsy_2_NC_0103931.91e-41Show info_outline
244611898..4614036PP_04602;bacteriophage DNA packaging protein;terminase, large subunit;phage;PHAGE_Phage_Gifsy_2_NC_0103930.0Show info_outline
254613993..4614526PP_04603;bacteriophage DNA packaging protein;terminase, small subunit;phage;PHAGE_Phage_Gifsy_2_NC_0103932.65e-127Show info_outline
264614734..4615213PP_04604;bacteriophage lysis protein;Lambda gpRz homolog;phage;PHAGE_Phage_Gifsy_2_NC_0103938.64e-115Show info_outline
274615231..4615683PP_04605;bacteriophage lysis protein;endolysin;lysozyme;phage;PHAGE_Phage_Gifsy_2_NC_0103935.19e-107Show info_outline
284615667..4615996PP_04606;bacteriophage lysis protein;holin;phage;PHAGE_Phage_Gifsy_2_NC_0103931.42e-73Show info_outline
294616272..4616958PP_04607;bacteriophage virulence determinant;GtgA;phage;PHAGE_Phage_Gifsy_2_NC_0103938.52e-169Show info_outline
304617319..4617768PP_04608;hypothetical protein;phage;PHAGE_Phage_Gifsy_2_NC_0103931.52e-105Show info_outline
314618763..4619452PP_04610;bacteriophage antiterminator protein Q;phage;PHAGE_Phage_Gifsy_1_NC_0103927.65e-112Show info_outline
324619582..4619809PP_04612;protein NinG;phage;PHAGE_Salmon_SEN34_NC_0286993.13e-12Show info_outline
334619806..4620405PP_04613;hypothetical protein;phage;PHAGE_Entero_mEp237_NC_0197042.52e-70Show info_outline
344620469..4620774PP_04614;hypothetical protein;phage;PHAGE_Salmon_SPN3UB_NC_0195451.72e-10Show info_outline
354623782..4624912PP_04617;diguanylate cyclase;phage;PHAGE_Bacill_SP_15_NC_0312453.33e-22Show info_outline
364625199..4625594PP_04618;LygF;phage;PHAGE_Shigel_Stx_NC_0291202.5e-24Show info_outline
374625607..4626068PP_04619;replication protein 14;phage;PHAGE_Escher_HK639_NC_0161581.25e-34Show info_outline
384626061..4627059PP_04620;hypothetical protein;phage;PHAGE_Escher_TL_2011b_NC_0194459.28e-38Show info_outline
394627587..4627841PP_04622;prophage antirepressor;phage;PHAGE_Entero_mEpX1_NC_0197091.84e-25Show info_outline
404627940..4628338PP_04623;prophage repressor;phage;PHAGE_Entero_mEpX1_NC_0197093.6e-25Show info_outline
414629635..4629841PP_04626;prophage Kil protein;phage;PHAGE_Cronob_phiES15_NC_0184546.5e-16Show info_outline
424630393..4633083PP_04628;exodeoxyribonuclease;phage;PHAGE_Erwini_phiEt88_NC_0152957.62e-95Show info_outline
434633076..4633906PP_04629;RecT;phage;PHAGE_Salmon_epsilon15_NC_0047751.44e-103Show info_outline
444634979..4635598PP_04633;integrase;phage;PHAGE_Entero_HK022_NC_0021663.83e-44Show info_outline

gi|00000000|ref|AAHGWQ010000001.1| Salmonella enterica subsp. enterica serovar Dublin strain 5010431, gc%: 52.12%

Download details as .txt file:detail.txt file_download

rRNA
Non phage-like protein
Hypothetical protein
tRNA
tmRNA
phage tail protein
phage integrase family protein
phage head-tail adapter protein

Bacterial, total 4242 CDS

#CDS PositionBLAST HitE-ValueSequence
142..1575S ribosomal RNA0.0Showinfo_outline
2114..2295S ribosomal RNA0.0Showinfo_outline
3287..4025S ribosomal RNA0.0Showinfo_outline
4211..942PP_00001; two-component system response regulator RstA0.0Showinfo_outline
53149..4093PP_00004; DUF1471 domain-containing protein0.0Showinfo_outline
64620..6149PP_00005; Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha0.0Showinfo_outline
76160..7548PP_00006; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta0.0Showinfo_outline
87723..8757PP_00007; AI-2E family transporter0.0Showinfo_outline
98893..9063PP_00008; hypothetical protein0.0Showinfo_outline
109175..9537PP_00009; multidrug/spermidine efflux SMR transporter subunit MdtJ0.0Showinfo_outline
119524..9853PP_00010; spermidine export protein MdtI0.0Showinfo_outline
129893..10714PP_00011; serine protease0.0Showinfo_outline
1310983..11231PP_00012; acid shock protein0.0Showinfo_outline
1411626..12879PP_00013; MFS transporter0.0Showinfo_outline
1512999..13898PP_00014; LysR family transcriptional regulator0.0Showinfo_outline
1614026..15246PP_00015; ROK family transcriptional regulator0.0Showinfo_outline
1715372..16067PP_00016; dethiobiotin synthase0.0Showinfo_outline
1816023..17312PP_00017; voltage-gated ClC-type chloride channel ClcB0.0Showinfo_outline
1917448..18596PP_00018; osmoprotectant ABC transporter ATP-binding protein OsmV0.0Showinfo_outline
2018596..19243PP_00019; osmoprotectant ABC transporter permease OsmW0.0Showinfo_outline
2119253..20155PP_00020; osmoprotectant ABC transporter substrate-binding protein OsmX0.0Showinfo_outline
2220184..20894PP_00021; osmoprotectant ABC transporter permease OsmY0.0Showinfo_outline
2321199..21813PP_00022; Tat proofreading chaperone DmsD0.0Showinfo_outline
2421856..22713PP_00023; dimethylsulfoxide reductase0.0Showinfo_outline
2522715..23332PP_00024; dimethylsulfoxide reductase subunit B0.0Showinfo_outline
2623343..25778PP_00025; dimethyl sulfoxide reductase subunit A0.0Showinfo_outline
2725877..28315PP_00026; dimethyl sulfoxide reductase subunit A0.0Showinfo_outline
2828472..28780PP_00027; DUF1161 domain-containing protein0.0Showinfo_outline
2928884..29594PP_00028; YnfC family lipoprotein0.0Showinfo_outline
3029635..30195PP_00029; spermidine N1-acetyltransferase0.0Showinfo_outline
3130231..30572PP_00030; DUF1283 family protein0.0Showinfo_outline
3230725..31051PP_00031; YnfA family protein0.0Showinfo_outline
3331173..32387PP_00032; D-galactonate dehydratase family protein0.0Showinfo_outline
3433471..34850PP_00034; MFS transporter0.0Showinfo_outline
3534994..36460PP_00035; mannitol dehydrogenase family protein0.0Showinfo_outline
3636527..36730PP_00036; putative selenium delivery protein YdfZ0.0Showinfo_outline
3736911..37597PP_00037; GntR family transcriptional regulator0.0Showinfo_outline
3837727..38473PP_00038; bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG0.0Showinfo_outline
3939846..40028PP_00040; stress-induced acidophilic repeat motif-containing protein0.0Showinfo_outline
4040148..40675PP_00041; 2-oxo-tetronate isomerase0.0Showinfo_outline
4141103..41495PP_00042; YdeI family stress tolerance OB fold protein0.0Showinfo_outline
42406080..406583PP_00418; type VI secretion system contractile sheath small subunit0.0Showinfo_outline
43406613..406825PP_00419; hypothetical protein0.0Showinfo_outline
44406874..408346PP_00420; type VI secretion system contractile sheath large subunit0.0Showinfo_outline
45408343..408759PP_00421; type VI secretion system baseplate subunit TssE0.0Showinfo_outline
46408764..410617PP_00422; type VI secretion system baseplate subunit TssF0.0Showinfo_outline
47410581..411669PP_00423; type VI secretion system baseplate subunit TssG0.0Showinfo_outline
48411694..412980PP_00424; type VI secretion system-associated FHA domain protein TagH0.0Showinfo_outline
49413007..413510PP_00425; type VI secretion system lipoprotein TssJ0.0Showinfo_outline
50413513..414844PP_00426; type VI secretion system baseplate subunit TssK0.0Showinfo_outline
51414849..415607PP_00427; DotU family type IV/VI secretion system protein0.0Showinfo_outline
52415620..418355PP_00428; type VI secretion system ATPase TssH0.0Showinfo_outline
53418352..419089PP_00429; type VI secretion system-associated protein TagO0.0Showinfo_outline
54419091..420503PP_00430; type VI secretion system protein TssA0.0Showinfo_outline
55420522..424043PP_00431; type VI secretion system membrane subunit TssM0.0Showinfo_outline
56424054..425418PP_00432; hypothetical protein0.0Showinfo_outline
57425434..425913PP_00433; Hcp family type VI secretion system effector0.0Showinfo_outline
58425946..426818PP_00434; LysM peptidoglycan-binding domain-containing protein0.0Showinfo_outline
59426838..427278PP_00435; hypothetical protein0.0Showinfo_outline
60427287..427658PP_00436; hypothetical protein0.0Showinfo_outline
61427782..428240PP_00437; DUF1311 domain-containing protein0.0Showinfo_outline
62428460..428762PP_00438; hypothetical protein0.0Showinfo_outline
63428841..429059PP_00439; hypothetical protein0.0Showinfo_outline
64429090..429383PP_00440; hypothetical protein0.0Showinfo_outline
65429550..430656PP_00441; Gfo/Idh/MocA family oxidoreductase0.0Showinfo_outline
66432231..432923PP_00443; outer membrane protein0.0Showinfo_outline
67432968..434122PP_00444; YjhT family mutarotase0.0Showinfo_outline
68434628..435308PP_00445; N-acetylmannosamine-6-phosphate 2-epimerase0.0Showinfo_outline
69435645..437141PP_00446; acetylneuraminate ABC transporter0.0Showinfo_outline
70437427..438308PP_00447; MurR/RpiR family transcriptional regulator0.0Showinfo_outline
71438414..439268PP_00448; phosphate starvation-inducible protein PhoH0.0Showinfo_outline
72439181..439477PP_00449; phosphate starvation-inducible protein PhoH0.0Showinfo_outline
73440095..441603PP_00450; sodium:proline symporter0.0Showinfo_outline
74442024..445986PP_00451; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase0.0Showinfo_outline
75446045..446440PP_00452; lysozyme inhibitor LprI family protein0.0Showinfo_outline
76446437..447075PP_00453; HTH-type transcriptional regulator RutR0.0Showinfo_outline
77447212..447379PP_00454; stress-induced protein0.0Showinfo_outline
78447764..448360PP_00455; NAD(P)H dehydrogenase (quinone)0.0Showinfo_outline
79448381..448608PP_00456; hypothetical protein0.0Showinfo_outline
80448641..449882PP_00457; bifunctional glucose-1-phosphatase/inositol phosphatase0.0Showinfo_outline
81450015..450521PP_00458; protein disulfide oxidoreductase0.0Showinfo_outline
82450511..451134PP_00459; DsbA family protein0.0Showinfo_outline
83451131..453017PP_00460; DUF255 domain-containing protein0.0Showinfo_outline
84453066..453428PP_00461; copper resistance protein0.0Showinfo_outline
85453349..453543PP_00462; hypothetical protein0.0Showinfo_outline
86453664..454584PP_00463; curved DNA-binding protein0.0Showinfo_outline
87454584..454889PP_00464; chaperone modulatory protein CbpM0.0Showinfo_outline
88454940..455095PP_00465; hypothetical protein0.0Showinfo_outline
89455543..455905PP_00466; anti-adapter protein IraM0.0Showinfo_outline
90456313..457251PP_00467; MBL fold metallo-hydrolase0.0Showinfo_outline
91457265..458161PP_00468; 4-hydroxyphenylacetate catabolism regulatory protein HpaA0.0Showinfo_outline
92458171..459547PP_00469; 4-hydroxyphenylacetate permease0.0Showinfo_outline
93459620..460411PP_00470; 4-hydroxy-2-oxoheptanedioate aldolase0.0Showinfo_outline
94460422..461225PP_00471; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase0.0Showinfo_outline
95461205..461405PP_00472; hypothetical protein0.0Showinfo_outline
96461369..461749PP_00473; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase0.0Showinfo_outline
97461759..462610PP_00474; 3,4-dihydroxyphenylacetate 2,3-dioxygenase0.0Showinfo_outline
98462612..464078PP_00475; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase0.0Showinfo_outline
99464075..465364PP_00476; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase0.0Showinfo_outline
100465640..466080PP_00477; homoprotocatechuate degradation operon regulator HpaR0.0Showinfo_outline
101466298..467860PP_00478; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component0.0Showinfo_outline
102467878..468390PP_00479; 4-hydroxyphenylacetate 3-monooxygenase reductase subunit0.0Showinfo_outline
103468387..468569PP_00480; hypothetical protein0.0Showinfo_outline
104468723..469133PP_00481; hydroxyisourate hydrolase0.0Showinfo_outline
105469269..469949PP_00482; DNA-binding response regulator HprR0.0Showinfo_outline
106469942..471306PP_00483; HAMP domain-containing protein0.0Showinfo_outline
107471479..472948PP_00484; C69 family dipeptidase0.0Showinfo_outline
108473057..473167PP_00485; hypothetical protein0.0Showinfo_outline
109473168..473338PP_00486; DUF3950 domain-containing protein0.0Showinfo_outline
110473670..475355PP_00487; SPI-1 type III secretion system effector inositol phosphate phosphatase SopB0.0Showinfo_outline
111475372..475713PP_00488; type III secretion system chaperone SigE0.0Showinfo_outline
112475723..476046PP_00489; hypothetical protein0.0Showinfo_outline
113476261..477136PP_00490; SPI-2 type III secretion system effector PipB0.0Showinfo_outline
114477358..478038PP_00491; type III secretion system effector protease PipA0.0Showinfo_outline
115478195..478282tRNA-Ser0.0Showinfo_outline
116478677..479336PP_00492; FtsH protease modulator YccA0.0Showinfo_outline
117479423..479752PP_00493; sulfurtransferase TusE0.0Showinfo_outline
118479749..480030PP_00494; acylphosphatase0.0Showinfo_outline
119480079..480858PP_00495; AraC family transcriptional regulator0.0Showinfo_outline
120480884..481432PP_00496; YbhB/YbcL family Raf kinase inhibitor-like protein0.0Showinfo_outline
121481647..482858PP_00497; ribosomal RNA large subunit methyltransferase I0.0Showinfo_outline
122482916..483233PP_00498; heat-shock protein HspQ0.0Showinfo_outline
123483278..483694PP_00499; CoA-binding protein0.0Showinfo_outline
124483865..484527PP_00500; DUF2057 family protein0.0Showinfo_outline
125484622..485080PP_00501; methylglyoxal synthase0.0Showinfo_outline
126485116..487170PP_00502; DNA helicase IV0.0Showinfo_outline
127487294..487740PP_00503; YccF domain-containing protein0.0Showinfo_outline
128487759..489912PP_00504; TIGR01666 family membrane protein0.0Showinfo_outline
129489899..490504PP_00505; TfoX family DNA transformation protein0.0Showinfo_outline
130490721..491230PP_00506; cell division inhibitor SulA0.0Showinfo_outline
131491587..492639PP_00507; porin OmpA0.0Showinfo_outline
132492711..493163PP_00508; macrodomain Ter protein MatP0.0Showinfo_outline
133493349..495109PP_00509; Lon protease family protein0.0Showinfo_outline
134495178..495696PP_00510; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase0.0Showinfo_outline
135495796..495963PP_00511; ribosome modulation factor0.0Showinfo_outline
136496219..496782PP_00512; membrane integrity-associated transporter subunit PqiC0.0Showinfo_outline
137496779..498419PP_00513; intermembrane transport protein PqiB0.0Showinfo_outline
138498424..499677PP_00514; membrane integrity-associated transporter subunit PqiA0.0Showinfo_outline
139499692..501599PP_00515; ABC transporter ATP-binding protein0.0Showinfo_outline
140501612..503720PP_00516; ribosomal RNA large subunit methyltransferase K/L0.0Showinfo_outline
141503819..504928PP_00517; MOSC domain-containing protein0.0Showinfo_outline
142504925..505467PP_00518; cell division protein ZapC0.0Showinfo_outline
143505633..506643PP_00519; quinone-dependent dihydroorotate dehydrogenase0.0Showinfo_outline
144506851..509463PP_00520; aminopeptidase N0.0Showinfo_outline
145518238..518570PP_00533; hypothetical protein0.0Showinfo_outline
146518567..519283PP_00534; hypothetical protein0.0Showinfo_outline
147519280..520332PP_00535; hypothetical protein0.0Showinfo_outline
148520332..520607PP_00536; hypothetical protein0.0Showinfo_outline
149520823..521320PP_00537; hypothetical protein0.0Showinfo_outline
150521320..523374PP_00538; hypothetical protein0.0Showinfo_outline
151523498..524085PP_00539; hypothetical protein0.0Showinfo_outline
152524085..524522PP_00540; hypothetical protein0.0Showinfo_outline
153524526..525920PP_00541; hypothetical protein0.0Showinfo_outline
154525925..526863PP_00542; hypothetical protein0.0Showinfo_outline
155526847..527257PP_00543; hypothetical protein0.0Showinfo_outline
156527275..527700PP_00544; hypothetical protein0.0Showinfo_outline
157527713..528198PP_00545; hypothetical protein0.0Showinfo_outline
158528263..529294PP_00546; DUF2184 domain-containing protein0.0Showinfo_outline
159529312..530184PP_00547; hypothetical protein0.0Showinfo_outline
160555371..556807PP_00580; sodium:alanine symporter family protein0.0Showinfo_outline
161557053..558267PP_00581; diaminopropionate ammonia-lyase0.0Showinfo_outline
162558585..559046PP_00583; Lrp/AsnC family transcriptional regulator0.0Showinfo_outline
163559247..560647PP_00584; asparagine--tRNA ligase0.0Showinfo_outline
164561241..562332PP_00585; porin OmpF0.0Showinfo_outline
165562517..563707PP_00586; aspartate aminotransferase0.0Showinfo_outline
166563769..564416PP_00587; MBL fold metallo-hydrolase0.0Showinfo_outline
167564444..564992PP_00588; DUF882 domain-containing protein0.0Showinfo_outline
168565252..567102PP_00589; L,D-transpeptidase0.0Showinfo_outline
169567447..571901PP_00590; chromosome partition protein MukB0.0Showinfo_outline
170571901..572605PP_00591; chromosome partition protein MukE0.0Showinfo_outline
171572586..573908PP_00592; chromosome partition protein MukF0.0Showinfo_outline
172573901..574704PP_00593; tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM0.0Showinfo_outline
173574840..575616PP_00594; envelope biogenesis factor ElyC0.0Showinfo_outline
174575596..576489PP_00595; hypothetical protein0.0Showinfo_outline
175576700..577446PP_00596; 3-deoxy-manno-octulosonate cytidylyltransferase0.0Showinfo_outline
176577443..577625PP_00597; protein YcaR0.0Showinfo_outline
177577677..578909PP_00598; winged helix-turn-helix domain-containing protein0.0Showinfo_outline
178578953..579930PP_00599; tetraacyldisaccharide 4'-kinase0.0Showinfo_outline
179579927..581675PP_00600; lipid A export ATP-binding/permease MsbA0.0Showinfo_outline
180581712..583976PP_00601; ComEC family protein0.0Showinfo_outline
181584206..584490PP_00602; integration host factor subunit beta0.0Showinfo_outline
182584646..586319PP_00603; 30S ribosomal protein S10.0Showinfo_outline
183586433..587116PP_00604; (d)CMP kinase0.0Showinfo_outline
184587289..588050PP_00605; metalloprotease0.0Showinfo_outline
185588193..589476PP_00606; 3-phosphoshikimate 1-carboxyvinyltransferase0.0Showinfo_outline
186589547..590635PP_00607; 3-phosphoserine/phosphohydroxythreonine transaminase0.0Showinfo_outline
187590821..591513PP_00608; DUF421 domain-containing protein0.0Showinfo_outline
188591650..593410PP_00609; 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO0.0Showinfo_outline
189593815..594672PP_00610; formate transporter FocA0.0Showinfo_outline
190594732..597014PP_00611; formate C-acetyltransferase0.0Showinfo_outline
191597090..598049PP_00612; SPI-2 type III secretion system effector SopD20.0Showinfo_outline
192598180..598506PP_00613; cytoplasmic protein0.0Showinfo_outline
193598598..599422PP_00614; pyruvate formate lyase 1-activating protein0.0Showinfo_outline
194599715..601136PP_00615; amino acid permease0.0Showinfo_outline
195601354..602502PP_00616; MFS transporter0.0Showinfo_outline
196602852..603715PP_00617; dimethyl sulfoxide reductase anchor subunit0.0Showinfo_outline
197603717..604334PP_00618; dimethylsulfoxide reductase subunit B0.0Showinfo_outline
198604345..606789PP_00619; dimethylsulfoxide reductase subunit A0.0Showinfo_outline
199607026..608318PP_00620; serine--tRNA ligase0.0Showinfo_outline
200608577..609920PP_00621; replication-associated recombination protein A0.0Showinfo_outline
201609930..610541PP_00622; outer membrane lipoprotein carrier protein LolA0.0Showinfo_outline
202610684..614766PP_00623; DNA translocase FtsK