Criteria for scoring prophage regions (as intact, questionable, or incomplete): Method 1: 1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used. Method 2: 1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered). Method 3: 1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found. 2. If the size of the region is greater than 30 Kb, the score will be increased by 10. 3. If there are at least 40 proteins in the region, the score will be increased by 10. 4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10. Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region. If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact. Totally 6 intact prophage regions have been identified. gi|00000000|ref|NC_000000| Klebsiella pneumoniae strain Q103 198, whole genome shotgun 6101330, gc%: 56.44% REGION REGION_LENGTH COMPLETENESS(score) SPECIFIC_KEYWORD REGION_POSITION RNA_NUM TOTAL_PROTEIN_NUM PHAGE_HIT_PROTEIN_NUM HYPOTHETICAL_PROTEIN_NUM PHAGE+HYPO_PROTEIN_PERCENTAGE BACTERIAL_PROTEIN_NUM ATT_SITE_SHOWUP PHAGE_SPECIES_NUM MOST_COMMON_PHAGE_NAME(hit_genes_count) FIRST_MOST_COMMON_PHAGE_NUM FIRST_MOST_COMMON_PHAGE_PERCENTAGE GC_PERCENTAGE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1 30Kb intact(150) terminase,portal,head,capsid,tail,plate,transposase contig,1:16-30029 21 44 41 2 97.7% 1 no 15 PHAGE_Salmon_SEN34_NC_028699(28),PHAGE_Haemop_Aaphi23_NC_004827(5),PHAGE_Phage_Gifsy_1_NC_010392(4),PHAGE_Pectob_ZF40_NC_019522(4),PHAGE_Aggreg_S1249_NC_013597(4),PHAGE_Escher_HK639_NC_016158(3),PHAGE_Psychr_pOW20_A_NC_020841(3),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Klebsi_vB_KpnM_KpV52_NC_041900(3),PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Lactob_Iacchus_NC_048084(2),PHAGE_Iodoba_phiPLPE_NC_011142(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_HK140_NC_019710(2),PHAGE_Rhizob_RHEph06_NC_027296(2),PHAGE_Vibrio_CP_T1_NC_019457(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Salmon_ZCSE2_NC_048179(2),PHAGE_Rhizob_RHEph04_NC_041908(2),PHAGE_Acinet_AP22_NC_017984(1),PHAGE_Klebsi_Seifer_NC_048732(1),PHAGE_Rheinh_vB_RspM_Barba18A_NC_048189(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Acinet_IME_AB2_NC_041857(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Klebsi_vB_KpnM_BIS47_NC_048656(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Escher_VB_EcoS_Golestan_NC_042084(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Salmon_UPF_BP2_NC_048649(1),PHAGE_Proteu_Mydo_NC_048741(1),PHAGE_Pantoe_vB_PagM_AAM37_NC_048766(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Acinet_YMC_13_01_C62_NC_024785(1),PHAGE_Escher_Mangalitsa_NC_048799(1),PHAGE_Klebsi_Soft_NC_048805(1),PHAGE_Salmon_birk_NC_048864(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Edward_PEi21_NC_021342(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Salmon_BP63_NC_031250(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Rheinh_vB_RspM_Barba8S_NC_048188(1),PHAGE_Klebsi_vB_KpnM_KpV79_NC_042041(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Klebsi_KpS8_NC_048873(1),PHAGE_Escher_K1_ind(2)_NC_041898(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Acinet_YMC11/12/R2315_NC_028855(1),PHAGE_Bacill_phiNIT1_NC_021856(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Klebsi_JD001_NC_020204(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Vibrio_vB_VchM_138_NC_019518(1),PHAGE_Acinet_WCHABP12_NC_041924(1),PHAGE_Erwini_vB_EhrS_59_NC_048198(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Escher_C130_2_NC_048067(1),PHAGE_Xantho_XcP1_NC_048147(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Salmon_SE13_NC_048763(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Serrat_Parlo_NC_048758(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1),PHAGE_Salmon_SE4_NC_048764(1),PHAGE_Xantho_Carpasina_NC_047962(1),PHAGE_Serrat_MTx_NC_048759(1),PHAGE_Escher_vB_EcoM_Goslar_NC_048170(1),PHAGE_Raoult_RP180_NC_048181(1),PHAGE_Pantoe_vB_PagM_PSKM_NC_048767(1),PHAGE_Klebsi_vB_KpnM_KB57_NC_028659(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Escher_K1_dep(1)_NC_027994(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Idioma_Phi1M2_2_NC_025471(1),PHAGE_Klebsi_KNP2_NC_048647(1),PHAGE_Escher_K1_dep(4)_NC_027993(1),PHAGE_Entero_VT2phi_272_NC_028656(1) 21 63.63% 52.40% 2 25Kb intact(150) tail,head,portal,terminase,lysin,protease contig,6,at,2195564:389-25442 0 44 39 4 97.7% 1 no 21 PHAGE_Salmon_Fels_1_NC_010391(12),PHAGE_Entero_mEp235_NC_019708(8),PHAGE_Cronob_ENT39118_NC_019934(5),PHAGE_Pseudo_phi2_NC_030931(5),PHAGE_Entero_HK106_NC_019768(5),PHAGE_Escher_HK75_NC_016160(4),PHAGE_Entero_HK544_NC_019767(4),PHAGE_Entero_HK633_NC_019719(4),PHAGE_Entero_mEp234_NC_019715(4),PHAGE_Escher_P13374_NC_018846(3),PHAGE_Pseudo_PMG1_NC_016765(3),PHAGE_Escher_ECP1_NC_049926(3),PHAGE_Escher_TL_2011c_NC_019442(3),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Entero_mEp390_NC_019721(3),PHAGE_Salmon_ST64T_NC_004348(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Entero_HK446_NC_019714(3),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Stenot_vB_SmaS_DLP_2_NC_029019(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Erwini_vB_EamP_S6_NC_019514(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Escher_phi191_NC_028660(2),PHAGE_Burkho_KL1_NC_018278(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381(1),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Aeromo_pIS4_A_NC_042037(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Escher_Sortsne_NC_048178(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Geobac_E2_NC_009552(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Rhodof_P26218_NC_029061(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Erwini_Faunus_NC_047978(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Vibrio_VvAW1_NC_020488(1),PHAGE_Salmon_Lumpael_NC_048113(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Altero_vB_AcoS_R7M_NC_048878(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Pseudo_73_NC_007806(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Escher_Lys12581Vzw_NC_049917(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Vibrio_pYD38_A_NC_021534(1),PHAGE_Pseudo_C5a_NC_047790(1),PHAGE_Klebsi_ST16_OXA48phi5.4_NC_049450(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Salmon_IME207_NC_031924(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Acinet_YMC11/11/R3177_NC_041866(1),PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Klebsi_Seifer_NC_048732(1),PHAGE_Entero_IME_EC2_NC_047742(1),PHAGE_Pantoe_vB_PagM_SSEM1_NC_048875(1),PHAGE_Klebsi_vB_KpnS_IME279_NC_047862(1),PHAGE_Burkho_AH2_NC_018283(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Salini_SMHB1_NC_047775(1),PHAGE_Paraco_Shpa_NC_041868(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_DE3_NC_042057(1) 9 27.27% 50.73% 3 34.1Kb intact(150) tail,plate,virion,lysis,head,terminase,capsid,portal contig,13,at,3539399:106835-140939 0 41 41 0 100% 0 no 4 PHAGE_Klebsi_ST147_VIM1phi7.1_NC_049451(40),PHAGE_Salmon_SP_004_NC_021774(11),PHAGE_Escher_vB_EcoM_12474III_NC_049457(10),PHAGE_Entero_WPhi_NC_005056(10),PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453(10),PHAGE_Entero_fiAA91_ss_NC_022750(10),PHAGE_Entero_186_NC_001317(9),PHAGE_Escher_pro483_NC_028943(9),PHAGE_Escher_P2_NC_041848(8),PHAGE_Salmon_SW9_NC_049459(7),PHAGE_Entero_P2_NC_001895(7),PHAGE_Escher_pro147_NC_028896(5),PHAGE_Yersin_L_413C_NC_004745(5),PHAGE_Erwini_EtG_NC_047833(5),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(3),PHAGE_Entero_PsP3_NC_005340(3),PHAGE_Klebsi_ST512_KPC3phi13.2_NC_049452(3),PHAGE_Salmon_SEN1_NC_029003(3),PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Klebsi_3LV2017_NC_047817(2),PHAGE_Caulob_Sansa_NC_047756(1),PHAGE_Burkho_KS14_NC_015273(1),PHAGE_Synech_S_CBS3_NC_015465(1),PHAGE_Burkho_KS10_NC_011216(1),PHAGE_Leptos_LE3_NC_048678(1),PHAGE_Klebsi_KpCHEMY26_NC_049467(1),PHAGE_Leptos_LE4_NC_048679(1),PHAGE_Synech_S_CBS1_NC_016164(1),PHAGE_Cyanop_KBS_S_2A_NC_020854(1),PHAGE_Pelagi_HTVC008M_NC_020484(1) 36 97.56% 52.96% 4 32.8Kb intact(150) lysin,transposase,terminase,portal,head,capsid,tail,structural,plate,integrase contig,17,at,4051306:1006-33890 0 44 44 0 100% 0 yes 20 PHAGE_Edward_GF_2_NC_026611(14),PHAGE_Aeromo_vB_AsaM_56_NC_019527(12),PHAGE_Burkho_BcepNY3_NC_009604(10),PHAGE_Xantho_OP2_NC_007710(10),PHAGE_Burkho_Bcep1_NC_005263(9),PHAGE_Burkho_Bcep43_NC_005342(7),PHAGE_Acinet_WCHABP1_NC_041966(7),PHAGE_Acinet_AP22_NC_017984(6),PHAGE_Burkho_Bcep781_NC_004333(6),PHAGE_Acinet_WCHABP12_NC_041924(6),PHAGE_Salmon_SEN34_NC_028699(5),PHAGE_Acinet_AbP2_NC_041998(5),PHAGE_Acinet_AB1_NC_042028(5),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(4),PHAGE_Acinet_YMC_13_01_C62_NC_024785(4),PHAGE_Pectob_ZF40_NC_019522(4),PHAGE_Phage_Gifsy_1_NC_010392(3),PHAGE_Acinet_phiAC_1_NC_028995(3),PHAGE_Escher_HK639_NC_016158(3),PHAGE_Acinet_YMC11/12/R2315_NC_028855(3),PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Bacter_APSE_2_NC_011551(2),PHAGE_Endosy_APSE_1_NC_000935(2),PHAGE_Cronob_ENT47670_NC_019927(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Acinet_LZ35_NC_031117(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Acinet_IME_AB2_NC_041857(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Dickey_Limestone_NC_019925(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Entero_EFDG1_NC_029009(1),PHAGE_Pectob_phiA41_NC_048659(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1),PHAGE_Entero_ECP3_NC_027335(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Bacill_T_NC_024205(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Klebsi_Magnus_NC_049462(1),PHAGE_Klebsi_Sin4_NC_049847(1),PHAGE_Pseudo_JBD44_NC_030929(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Raoult_Ro1_NC_048682(1),PHAGE_Pantoe_vB_PagM_AAM37_NC_048766(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Escher_SH2026Stx1_NC_049919(1),PHAGE_Acinet_IME_AB3_NC_023590(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Klebsi_TSK1_NC_048126(1),PHAGE_Salmon_SKML_39_NC_019910(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Salmon_UPF_BP1_NC_047875(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Klebsi_JD001_NC_020204(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Erwini_vB_EhrS_59_NC_048198(1),PHAGE_Vibrio_VvAW1_NC_020488(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Stx2_c_Stx2a_F451_NC_049924(1),PHAGE_Vibrio_VBM1_NC_020850(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Klebsi_KpCHEMY26_NC_049467(1),PHAGE_Pectob_vB_PatP_CB1_NC_048653(1),PHAGE_Altero_vB_AcoS_R7M_NC_048878(1),PHAGE_Pantoe_vB_PagM_PSKM_NC_048767(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Pectob_vB_PatP_CB4_NC_048654(1),PHAGE_Klebsi_vB_KpnS_KpV522_NC_047784(1) 13 31.81% 53.54% 5 22.3Kb incomplete(20) integrase contig,29,at,5082570:37951-60282 0 27 23 1 88.8% 3 yes 20 PHAGE_Salmon_SEN34_NC_028699(4),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Escher_Lys12581Vzw_NC_049917(3),PHAGE_Escher_HK639_NC_016158(3),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_HK630_NC_019723(2),PHAGE_Entero_mEpX1_NC_019709(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Stx2_c_Stx2a_F451_NC_049924(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Entero_VT2_Sakai_NC_000902(2),PHAGE_Escher_ArgO145_NC_049918(2),PHAGE_Escher_PA28_NC_041935(2),PHAGE_Serrat_phiMAM1_NC_020083(1),PHAGE_Erwini_vB_EamM_Alexandra_NC_047995(1),PHAGE_Escher_SH2026Stx1_NC_049919(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Ralsto_RSK1_NC_022915(1),PHAGE_Dickey_vB_DsoM_AD1_NC_048054(1),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Escher_phiSUSP2_NC_028935(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Escher_HY02_NC_028872(1),PHAGE_Erwini_vB_EamM_Y3_NC_047880(1),PHAGE_Escher_phiSUSP1_NC_028808(1),PHAGE_Entero_EspM4VN_NC_049384(1),PHAGE_Vibrio_pYD38_A_NC_021534(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Serrat_vB_SmaA_3M_NC_048736(1),PHAGE_Pantoe_vB_PagM_LIET2_NC_048751(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Erwini_vB_EamM_Yoloswag_NC_047815(1),PHAGE_Arthro_Coral_NC_048099(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Salmon_epsilon34_NC_011976(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(1),PHAGE_Salmon_IME207_NC_031924(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Aeromo_pIS4_A_NC_042037(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Shigel_Ss_VASD_NC_028685(1) 2 14.81% 55.12% 6 34.7Kb intact(150) integrase,lysin,terminase,portal,head,tail,transposase contig,30,at,5142852:21192-55974 0 46 38 5 93.4% 3 no 22 PHAGE_Salmon_118970_sal3_NC_031940(14),PHAGE_Entero_mEp235_NC_019708(8),PHAGE_Salmon_ST64B_NC_004313(6),PHAGE_Entero_HK106_NC_019768(5),PHAGE_Entero_HK446_NC_019714(5),PHAGE_Pseudo_PMG1_NC_016765(5),PHAGE_Entero_HK544_NC_019767(5),PHAGE_Escher_HK75_NC_016160(5),PHAGE_Entero_mEp390_NC_019721(4),PHAGE_Pseudo_phi2_NC_030931(4),PHAGE_Escher_ECP1_NC_049926(4),PHAGE_Entero_mEp234_NC_019715(4),PHAGE_Entero_mEp460_NC_019716(4),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Pseudo_phi297_NC_016762(3),PHAGE_Pseudo_D3_NC_002484(3),PHAGE_Entero_HK97_NC_002167(3),PHAGE_Pseudo_JBD44_NC_030929(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Entero_phi80_NC_021190(2),PHAGE_Entero_HK633_NC_019719(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Pseudo_AF_NC_019923(1),PHAGE_Escher_503458_NC_049341(1),PHAGE_Paraco_Shpa_NC_041868(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Escher_520873_NC_049344(1),PHAGE_Pectob_Peat1_NC_029081(1),PHAGE_Agroba_7_7_1_NC_019519(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Staphy_vB_SauM_Romulus_NC_020877(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Pectob_Koot_NC_048118(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Stx2_c_Stx2a_F451_NC_049924(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Geobac_E2_NC_009552(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Pseudo_Dobby_NC_048109(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Pseudo_YMC11/06/C171_PPU_BP_NC_030923(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Escher_500465_1_NC_049342(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Staphy_vB_SauM_Remus_NC_022090(1) 6 30.43% 50.69% 7 38Kb intact(150) tail,head,capsid,portal,terminase,lysin contig,33,at,5297245:4258-42259 0 55 47 8 100% 0 no 34 PHAGE_Entero_mEp237_NC_019704(9),PHAGE_Salmon_SPN3UB_NC_019545(8),PHAGE_Acinet_YMC11/11/R3177_NC_041866(7),PHAGE_Escher_HK639_NC_016158(7),PHAGE_Salmon_SEN34_NC_028699(7),PHAGE_Pseudo_phiPSA1_NC_024365(6),PHAGE_Acinet_Bphi_B1251_NC_019541(6),PHAGE_Phage_Gifsy_2_NC_010393(5),PHAGE_Phage_Gifsy_1_NC_010392(5),PHAGE_Pseudo_PS_1_NC_029066(5),PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(5),PHAGE_Pseudo_PAJU2_NC_011373(4),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Entero_HK225_NC_019717(3),PHAGE_Shigel_Stx_NC_029120(3),PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Erwini_phiEt88_NC_015295(2),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Serrat_Eta_NC_021563(2),PHAGE_Stenot_vB_SmaS_DLP_2_NC_029019(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Escher_Lys12581Vzw_NC_049917(2),PHAGE_Escher_PA2_NC_028449(2),PHAGE_Pseudo_phi297_NC_016762(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Escher_ArgO145_NC_049918(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Burkho_BcepC6B_NC_005887(2),PHAGE_Pseudo_JBD44_NC_030929(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Salmon_ST64T_NC_004348(2),PHAGE_Entero_mEp390_NC_019721(2),PHAGE_Burkho_KL1_NC_018278(2),PHAGE_Staphy_EW_NC_007056(1),PHAGE_Salmon_II_E1_NC_010495(1),PHAGE_Pseudo_MP29_NC_011613(1),PHAGE_Vibrio_pYD38_B_NC_021561(1),PHAGE_Pseudo_H70_NC_027384(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Rhodof_P26218_NC_029061(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Erwini_vB_EhrS_59_NC_048198(1),PHAGE_Erwini_Faunus_NC_047978(1),PHAGE_Vibrio_VvAW1_NC_020488(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Dinoro_vB_DshS_R5C_NC_041921(1),PHAGE_Pseudo_H105/1_NC_015293(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Pseudo_MP48_NC_024782(1),PHAGE_Pseudo_JD024_NC_024330(1),PHAGE_Altero_vB_AcoS_R7M_NC_048878(1),PHAGE_Pseudo_73_NC_007806(1),PHAGE_Edward_eiAU_NC_042029(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Escher_K1_dep(1)_NC_027994(1),PHAGE_Klebsi_vB_KpnS_KpV522_NC_047784(1),PHAGE_Liston_phiHSIC_NC_006953(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Klebsi_Seifer_NC_048732(1),PHAGE_Pantoe_vB_PagM_SSEM1_NC_048875(1),PHAGE_Staphy_37_NC_007055(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864(1),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Pseudo_LKO4_NC_041934(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Caulob_phiCbK_NC_019405(1),PHAGE_Bacill_PM1_NC_020883(1),PHAGE_Pectob_PM1_NC_023865(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Caulob_CcrBL10_NC_048045(1),PHAGE_Pseudo_AF_NC_019923(1),PHAGE_Erwini_vB_EhrS_49_NC_048197(1),PHAGE_Proteu_Mydo_NC_048741(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Xantho_Xp15_NC_007024(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_118970_sal4_NC_030919(1) 5 16.36% 51.98% 8 30.7Kb questionable(80) tail,terminase,transposase,portal contig,40,at,5558810:1-30705 0 41 39 1 97.5% 1 no 6 PHAGE_Klebsi_phiKO2_NC_005857(32),PHAGE_Entero_N15_NC_001901(20),PHAGE_Yersin_PY54_NC_005069(17),PHAGE_Escher_RCS47_NC_042128(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Vibrio_VP882_NC_009016(3),PHAGE_Salmon_ST64B_NC_004313(3),PHAGE_Halomo_phiHAP_1_NC_010342(2),PHAGE_Escher_TL_2011b_NC_019445(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Entero_Tyrion_NC_031077(2),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Gordon_Nymphadora_NC_031061(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Escher_Tls_NC_009540(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Gordon_Kita_NC_031233(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Klebsi_Sushi_NC_028774(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Escher_ECA2_NC_047766(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Vibrio_Valm_yong1_NC_049477(1),PHAGE_Entero_P4_NC_001609(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Escher_ECBP5_NC_027330(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Bacill_phiNIT1_NC_021856(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Klebsi_KpKT21phi1_NC_048143(1),PHAGE_Shewan_1/44_NC_025463(1),PHAGE_Brevib_Sundance_NC_028749(1),PHAGE_Entero_EFP01_NC_047796(1),PHAGE_Salini_SMHB1_NC_047775(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Geobac_E3_NC_029073(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Escher_LL5_NC_047985(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Erwini_vB_EhrS_59_NC_048198(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Clostr_c_st_NC_007581(1),PHAGE_Burkho_phi6442_NC_009235(1) 30 78.04% 49.95% 9 13.1Kb incomplete(40) terminase,portal contig,54,at,5830164:21-13126 0 19 17 1 94.7% 1 no 12 PHAGE_Klebsi_phiKO2_NC_005857(7),PHAGE_Shigel_SfIV_NC_022749(4),PHAGE_Shigel_SfII_NC_021857(4),PHAGE_Yersin_PY54_NC_005069(4),PHAGE_Entero_cdtI_NC_009514(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Entero_mEp237_NC_019704(3),PHAGE_Salmon_SPN3UB_NC_019545(3),PHAGE_Salmon_SEN34_NC_028699(3),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Burkho_phi6442_NC_009235(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Escher_K1_dep(4)_NC_027993(1),PHAGE_Escher_Lys12581Vzw_NC_049917(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Escher_K1_ind(2)_NC_041898(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Stx2_c_Stx2a_F451_NC_049924(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Escher_K1_dep(1)_NC_027994(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Escher_VB_EcoS_Golestan_NC_042084(1),PHAGE_Raoult_RP180_NC_048181(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Burkho_phiE125_NC_003309(1) 6 36.84% 46.54%